Wolbachia supergroup R?
In my first blog post, I will discuss a recent paper about Wolbachia classification.
In a recent study, Wang et al. (2016) investigated Wolbachia sequences from cave spiders (Telema ssp.). They found that these belong to a genetic lineage distinct from all other described Wolbachia strains (in Wolbachia, those genetically distinct lineages are called “supergroups”). I re-analysed these data and found that in fact, Wolbachia strains from cave spiders cluster within supergroup A (Gerth 2016).
[If you are unfamiliar with Wolbachia biology, or the supergroup classification system, the excellent review by Werren et al. (2008) is a good starting point.]
After I uploaded my re-analysis to bioRxiv, Guan-Hong Wang has kindly send me the alignment files they used in their study. In this post, I want to try to use these data and illustrate why their and my analysis are discordant and also, why their conclusions are likely misled.
This is the website of Michael Gerth. I am a biologist with an interest in insects and the microbes within them. Click here to learn more.